rs62121381 chr19:38769793 C>T
- Sequence
gggcagaaaaccccaggtcctgaa[C/T]gcgcctgggccccgcggcgaacct
- ASB in cell types
- primary B-CLL cells GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- BRD4_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 2.61 | n/a | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.84 | 0.45 | 1.04 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid