rs62122117 chr2:20677506 T>C
- Sequence
tgcactgctccatctgaccagcag[T/C]ggcaacagccacaaccagttctgc
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line) liver neural progenitors
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.62 | 2.20 | 1.34 | -0.56 | Weak Concordant | |||
| RAD21_HUMAN | 3.67 | -0.45 | 1.25 | n/a | n/a |
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Motif analysis
