rs62124003 chr19:14288973 C>A
- Sequence
ggtgggagctttcccggttctgag[C/A]gggaggagggggcgtggcctgatc
- ASB in cell types
- HT1080 (fibrosarcoma) HCT-116 (colon carcinoma) foreskin keratinocyte uterus
- ASB for transcription factors
- CTCF_HUMAN SMCA4_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.54 | 1.41 | 1.48 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.14 | -1.07 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.32 | -0.09 | 1.25 | n/a | n/a |
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