rs62125457 chr19:3061346 G>A
- Sequence
aggagggagcggccgcgcagctgc[G/A]gcgccccccctcctgccccacttc
- ASB in cell types
- K562 (myelogenous leukemia) GM12892 (female B-cells lymphoblastoid cell line) GBM39 (Human brain tumor) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN MAZ_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.34 | 1.45 | 1.28 | 0.35 | Weak Concordant | |||
| MAZ_HUMAN | -5.17 | 2.99 | 2.00 | 0.02 | Weak Concordant |
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Motif analysis
