rs62130065 chr19:1612720 T>C
- Sequence
agcagtgcgggtacacggctggtg[T/C]gggtgtgggcagcagtgcgggtac
- ASB in cell types
- HEK293 (embryonic kidney) HT1080 (fibrosarcoma)
- ASB for transcription factors
- ZN157_HUMAN ZFHX2_HUMAN SSRP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN157_HUMAN | 0.49 | n/a | 6.00 | 0.00 | Weak Discordant | |||
| ZFHX2_HUMAN | 3.00 | n/a | 2.00 | n/a | n/a | |||
| SSRP1_HUMAN | 1.90 | -1.66 | 1.00 | n/a | n/a |
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Motif analysis
