rs62130066 chr19:1612747 G>A
- Sequence
gtgtgggcagcagtgcgggtacac[G/A]gcttacgttggtggacacagcagt
- ASB in cell types
- HEK293 (embryonic kidney) HT1080 (fibrosarcoma)
- ASB for transcription factors
- ZN157_HUMAN SSRP1_HUMAN ZFHX2_HUMAN HIC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN157_HUMAN | 1.08 | n/a | 6.00 | -1.05 | Weak Concordant | |||
| SSRP1_HUMAN | 3.51 | -3.21 | 1.00 | n/a | n/a | |||
| ZFHX2_HUMAN | 3.75 | n/a | 2.00 | n/a | n/a | |||
| HIC1_HUMAN | 3.03 | -5.54 | 2.00 | n/a | No Hit |
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Motif analysis
