rs62130107 chr19:1716282 T>G
- Sequence
ctctatgaaactgtgctgagtgag[T/G]gataagacagtggcagaatcacat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MNT_HUMAN ARI1B_HUMAN KDM1A_HUMAN NCOR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 3.23 | n/a | 2.00 | n/a | No Hit | |||
| ARI1B_HUMAN | 3.12 | n/a | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.59 | -1.38 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | 2.90 | n/a | 2.00 | n/a | n/a | |||
| MEIS2_HUMAN | 2.72 | -4.94 | 2.00 | -2.02 | Concordant |
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Motif analysis
