rs62132014 chr19:48401432 C>G

Sequence
tagatggcagtcaggggaggcctc[C/G]ctgaggcggtgacacctgagctgg
ASB for transcription factors
GLIS1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GLIS1_HUMAN 2.87 n/a 5.2·10-61.00 2.00 -4.66 Concordant
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Motif analysis

GLIS1_HUMAN Concordant
GLIS1_HUMAN pic

Genetic associations

EMBL-EBI self-reported math ability,  self-reported math ability (mtag)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cerebellum,  Esophagus_Gastroesophageal_Junction,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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