rs62133102 chr19:54231461 C>T
- Sequence
cattcatatgaatatgtatattgt[C/T]tacagctatctatatctctgtttt
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma)
- ASB for transcription factors
- ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | -0.39 | 2.63 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Esophagus_Muscularis, Lung, Nerve_Tibial, Thyroid, Whole_Blood