rs62139637 chr2:65577063 C>G
- Sequence
atcctgggaaggcagggactcagt[C/G]tatcttctctcgtgcattcaggac
- ASB in cell types
- BEAS-2B (bronchial epithelium) VCaP (prostate carcinoma) endometrial stromal cells
- ASB for transcription factors
- GCR_HUMAN PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.14 | 2.86 | 1.53 | 3.64 | Concordant | |||
| PRGR_HUMAN | 0.09 | 2.73 | 1.50 | 4.17 | Concordant |
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Motif analysis
