rs62140665 chr2:51080108 T>C
- Sequence
gtagggtattcagtcttccctgtg[T/C]cagtattatttacagggcaaatag
- ASB in cell types
- VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.81 | 1.93 | 1.86 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.69 | 0.97 | 1.96 | n/a | No Hit |
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