rs62148882 chr2:33274642 C>T
- Sequence
ctctttcatggcatttctgactcc[C/T]tactgacagcaaattccattgctt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- MTG16_HUMAN IKZF1_HUMAN ARI1B_HUMAN ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | 2.47 | n/a | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.02 | -1.15 | 2.00 | n/a | n/a | |||
| ARI1B_HUMAN | 2.04 | n/a | 2.00 | n/a | n/a | |||
| ATF3_HUMAN | 2.17 | -0.81 | 2.00 | n/a | No Hit |
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