rs62158170 chr2:113324598 A>G
- Sequence
tggctcagggcatagagggggctc[A/G]ggacacatggagcaccccctcgcc
- ASB in cell types
- hNSC (neural stem cells)
- ASB for transcription factors
- CHD8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CHD8_HUMAN | 2.54 | -2.58 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
EMBL-EBI diastolic blood pressure, insomnia, insomnia symptoms (never/rarely vs. sometimes/usually), insomnia symptoms (never/rarely vs. usually), sleep duration
GTEx eQTL Adrenal_Gland, Cells_Cultured_fibroblasts, Lung, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid