rs62161711 chr2:138501652 A>G
- Sequence
cccgccgggagcctagtgccatgc[A/G]gcagcggcggcggtggcggcttcc
- ASB in cell types
- HeLa (cervical adenocarcinoma) GM19240 (B cells Lymphoblastoid Cell Lines) CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- INT11_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| INT11_HUMAN | -2.56 | 1.77 | 2.00 | n/a | n/a | |||
| STAG1_HUMAN | 1.54 | 0.70 | 1.00 | n/a | n/a |
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