rs62170789 chr2:170102059 A>G
- Sequence
gtgctgaataacaaaaaacactgc[A/G]gagaatattctctcacccatctcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN EMSY_HUMAN ZN316_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.30 | -0.72 | 1.00 | n/a | n/a | |||
| EMSY_HUMAN | -2.52 | 2.62 | 1.00 | n/a | n/a | |||
| ZN316_HUMAN | -0.74 | 2.09 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Skin_Sun_Exposed_Lower_leg, Thyroid