rs62172345 chr2:136932881 A>G
- Sequence
gtaaggaaggatgaaaggggctca[A/G]tagcttccctttcaggccaccagg
- ASB in cell types
- K562 (myelogenous leukemia) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.31 | 1.14 | 1.27 | -0.35 | Weak Discordant |
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Motif analysis
