rs62179978 chr2:62578487 C>T
- Sequence
accacaattgcagaagctgagtaa[C/T]ttgtcagctggtcatttgtaacca
- ASB in cell types
- A549 (lung carcinoma) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- JUN_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 0.69 | 1.32 | 1.07 | 0.42 | Weak Concordant | |||
| TCF21_HUMAN | 2.40 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
