rs62181670 chr2:171523636 C>T
- Sequence
gctgcgtccgtgtttggcccgcgg[C/T]gagccagccccgggcctgcattct
- ASB in cell types
- K562 (myelogenous leukemia) primary B-CLL cells HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- INT11_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| INT11_HUMAN | 1.84 | 0.30 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Testis