rs62182093 chr2:172172692 C>A
- Sequence
ggcttgggagcgcgctgcagccaa[C/A]gccgcgttcagccccgggcgcaac
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) HEK293 (embryonic kidney) 22RV1 (prostate carcinoma) ovary
- ASB for transcription factors
- STAG1_HUMAN SMC1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.39 | -1.30 | 1.11 | n/a | n/a | |||
| SMC1A_HUMAN | 2.15 | -1.13 | 1.50 | n/a | n/a |
Items per page:
1 – 2 of 2