rs62182790 chr2:218217086 G>A
- Sequence
cgctcgcgttcacgagtggttgaa[G/A]cggaaatggcgccgcggggccgcg
- ASB in cell types
- macrophages form periferal blood CD14+ monocytes thymus-derived CD34- cells pancreas
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN SPI1_HUMAN BC11B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.27 | 1.13 | 1.02 | n/a | No Hit | |||
| STAT1_HUMAN | 1.55 | -0.18 | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 2.87 | 0.87 | 1.50 | -0.74 | Weak Concordant | |||
| BC11B_HUMAN | 1.68 | -0.26 | 2.25 | n/a | n/a |
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Motif analysis
