rs62183857 chr2:172099203 C>A
- Sequence
agccgctccgcgctgagtgagtca[C/A]cccgccgccggccggagaatccct
- ASB in cell types
- HCT-116 (colon carcinoma) HMLE-Twist-ER (breast cancer)
- ASB for transcription factors
- FOS_HUMAN SMAD3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOS_HUMAN | 1.53 | -1.53 | 1.00 | -3.89 | Concordant | |||
| SMAD3_HUMAN | 2.28 | -1.98 | 1.00 | n/a | No Hit |
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Motif analysis
