rs62184861 chr2:203811709 A>G
- Sequence
gtggcacagttcctgctgaggaca[A/G]ggtccagggtgtgcccgcaccagg
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) SNU-16 (Gastric adenocarcinoma) CD14+ monocytes macrophages form periferal blood
- ASB for transcription factors
- TF65_HUMAN HNF4A_HUMAN STAT1_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.36 | n/a | 3.00 | n/a | No Hit | |||
| HNF4A_HUMAN | 2.54 | n/a | 1.50 | -4.02 | Concordant | |||
| STAT1_HUMAN | 2.00 | -0.28 | 4.00 | n/a | No Hit | |||
| SPI1_HUMAN | 1.23 | 0.63 | 1.29 | n/a | No Hit |
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Motif analysis
