rs62187039 chr2:176018946 C>G
- Sequence
tagattcagaggtggcacacatca[C/G]tacccccgcattctgcaagaaaac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- SMCE1_HUMAN EMSY_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCE1_HUMAN | 2.59 | -2.46 | 1.00 | n/a | n/a | |||
| EMSY_HUMAN | 1.39 | -1.39 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Spleen, Thyroid, Whole_Blood