rs62193641 chr2:230794054 T>A
- Sequence
tgccagccccgggtatggtgtgca[T/A]ctgtttgtcccaacattggtggtg
- ASB in cell types
- 22RV1 (prostate carcinoma) CD14+ monocytes HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- ANDR_HUMAN STAT1_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.41 | -1.65 | 2.00 | 3.00 | Discordant | |||
| STAT1_HUMAN | 1.99 | -0.64 | 2.00 | n/a | No Hit | |||
| TCF21_HUMAN | 1.85 | n/a | 2.50 | -2.09 | Concordant |
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Motif analysis
