rs62199315 chr20:62606690 G>C

Sequence
gcgaggcgggggcagtgttcagct[G/C]tagctgctccctggggacccacac
ASB in cell types
Ishikawa (endometrial adenocarcinoma)
ASB for transcription factors
ZFX_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFX_HUMAN 1.72 -1.41 0.011.00 2.33 n/a No Hit
ESR1_HUMAN 1.29 1.21 1.000.02 1.17 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Gastroesophageal_Junction Whole_Blood

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