rs62201031 chr20:17377456 G>A
- Sequence
tgcacattgggccccagggggcat[G/A]tggcctccatgataaaagggcgac
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.38 | 1.87 | 1.05 | 0.44 | Weak Concordant | |||
| STAG1_HUMAN | 0.46 | 2.46 | 1.00 | n/a | n/a |
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Motif analysis
