rs62203480 chr20:42435401 C>T
- Sequence
cttctgaggtggtagcattcacat[C/T]aatacctgtagtaggagaatgagt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN REQU_HUMAN IKZF2_HUMAN JUNB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.54 | 1.98 | 1.25 | n/a | n/a | |||
| REQU_HUMAN | -2.53 | 2.87 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -1.01 | 1.34 | 1.00 | n/a | n/a | |||
| JUNB_HUMAN | -2.15 | 2.42 | 1.00 | n/a | No Hit |
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