rs62204969 chr20:61874940 C>T
- Sequence
ctcctcggtcttgctggcctcaac[C/T]cttctgctccaagttggcggcttc
- ASB in cell types
- glioblastoma cells HCT-116 (colon carcinoma) GM02630 (Fanconi anemi) MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.11 | -0.45 | 2.00 | n/a | No Hit |
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