rs62206555 chr20:3749877 G>A
- Sequence
tggtgagtagccaggcggcgcccc[G/A]gtacccagcgcgacccgggctccg
- ASB in cell types
- HCT-116-RAD21-mAC pancreas ID00014 (lymphoblastoid cell, DiGeorge syndrome) adrenal gland
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.97 | 1.22 | 1.20 | 0.22 | Weak Concordant |
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Motif analysis
