rs62208292 chr20:37336057 G>A
- Sequence
caccatccctccagcctgccccct[G/A]gacatcgcactgcttcccttagca
- ASB in cell types
- MS-1 (Small cell lung carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.28 | 2.90 | 1.17 | -0.17 | Weak Discordant |
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Motif analysis
