rs62209271 chr20:63484033 C>T
- Sequence
gcccccttcagccagacagcagcc[C/T]aggtgtccagccagctgcaagcat
- ASB in cell types
- MS-1 (Small cell lung carcinoma) foreskin keratinocyte RH4 (alveolar rhabdomyosarcoma) LUHMES (lund human mesencephalic cells)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.77 | 1.96 | 2.05 | n/a | No Hit | |||
| STAG1_HUMAN | -0.65 | 1.53 | 1.08 | n/a | n/a |
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