rs62229223 chr21:43776747 T>C
- Sequence
gcgcagcgctgcaggggtcagggg[T/C]caggggtcccggccccgcgggagc
- ASB in cell types
- breast tumor GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- FOXK2_HUMAN NR2F6_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.46 | -2.49 | 1.00 | n/a | No Hit | |||
| NR2F6_HUMAN | 2.23 | -0.35 | 1.25 | 0.45 | Weak Discordant | |||
| ESR1_HUMAN | 2.81 | 0.35 | 1.75 | -3.06 | Concordant |
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Motif analysis
