rs62253668 chr3:55899939 T>C
- Sequence
ttctgatcccatggaaaaagcagt[T/C]gcaggtaaacatagcctctaaagg
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.11 | 0.55 | 1.02 | n/a | No Hit | |||
| STAG1_HUMAN | 2.06 | 0.92 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2