rs62254362 chr3:44041911 C>A
- Sequence
caagagtgcatgcagatgtggttt[C/A]atgtaagttcttgttctccttttg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN MEF2B_HUMAN AHR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.55 | -1.98 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 2.67 | -2.33 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | 2.47 | n/a | 1.00 | -2.63 | Concordant | |||
| AHR_HUMAN | 2.02 | -0.40 | 1.00 | n/a | No Hit |
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Motif analysis
