rs62270384 chr3:159789253 G>T
- Sequence
aatgttgcaatcttgagtctaaag[G/T]ctgtctggaggcagaatttcgtcc
- ASB in cell types
- SNU-16 (Gastric adenocarcinoma)
- ASB for transcription factors
- HNF4A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | n/a | 3.76 | 2.00 | 1.75 | Weak Concordant |
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Motif analysis
