rs62273861 chr3:156817478 G>T
- Sequence
accagagcaaggacggtggctttg[G/T]gacgaaatttctgtccgctctgca
- ASB in cell types
- HEK293 (embryonic kidney) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- PRD10_HUMAN PRDM4_HUMAN ZN629_HUMAN ZBT17_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRD10_HUMAN | -2.34 | 2.72 | 1.00 | n/a | n/a | |||
| PRDM4_HUMAN | -2.53 | 2.87 | 1.00 | n/a | No Hit | |||
| ZN629_HUMAN | -2.97 | 2.03 | 1.50 | n/a | n/a | |||
| ZBT17_HUMAN | -1.60 | 1.90 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Pancreas, Skin_Sun_Exposed_Lower_leg, Thyroid