rs62275649 chr3:156644009 G>A
- Sequence
tacacacacactcatgcggtttcc[G/A]cacagctatctctgagggtagggg
- ASB in cell types
- Th1-cells MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- TBX21_HUMAN CDK8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | 2.23 | -1.63 | 1.00 | n/a | No Hit | |||
| CDK8_HUMAN | 1.73 | 1.11 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Caudate_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid