rs62275898 chr3:109563478 G>C
- Sequence
cagtcatgcttcgtgttaagtctg[G/C]ggaagtgtgagtcaattacacatc
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- SMCA4_HUMAN FOXP1_HUMAN ETS1_HUMAN FLI1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 0.14 | 1.35 | 1.00 | n/a | n/a | |||
| FOXP1_HUMAN | -2.84 | 2.74 | 1.00 | n/a | No Hit | |||
| ETS1_HUMAN | -0.32 | 2.25 | 1.00 | 3.89 | Concordant | |||
| FLI1_HUMAN | -0.86 | 1.60 | 1.00 | 4.53 | Concordant | |||
| SPI1_HUMAN | 0.66 | 0.91 | 1.07 | -0.92 | Weak Discordant |
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Motif analysis
