rs62282873 chr3:101266853 G>A
- Sequence
ctgaagtttgaatcatttctggag[G/A]ttaagctggccacttcccccactg
- ASB in cell types
- D283 Med (medulloblastoma)
- ASB for transcription factors
- OTX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | n/a | 2.39 | 1.50 | 5.74 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Colon_Sigmoid, Esophagus_Muscularis, Heart_Atrial_Appendage, Nerve_Tibial, Pancreas, Thyroid