rs62286506 chr4:8303835 A>G
- Sequence
gactcagcattgtctgtccattcc[A/G]tgactcagcattgcctgtctgtcc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) keratinocytes
- ASB for transcription factors
- HTF4_HUMAN MAFK_HUMAN SNAI2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | 3.57 | -0.56 | 1.50 | n/a | No Hit | |||
| MAFK_HUMAN | 0.74 | n/a | 1.67 | -1.96 | Weak Concordant | |||
| SNAI2_HUMAN | n/a | 2.44 | 1.50 | n/a | No Hit |
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Motif analysis
