rs62291802 chr3:174304131 T>G
- Sequence
tggctccaaagtccttttatttgt[T/G]tttcctctagaccaatgcaatctg
- ASB in cell types
- liver MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- HNF4A_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 3.14 | -2.94 | 1.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 3.01 | -3.10 | 2.50 | -0.35 | Weak Concordant |
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Motif analysis
