rs62294074 chr4:763810 C>A

Sequence
caaaacctggaagcgaccaagatg[C/A]ccttcagtagataagtggaaaaat
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 1.20 2.08 0.141.6·10-4 2.50 1.70 Weak Concordant
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Motif analysis

ESR1_HUMAN Weak Concordant
ESR1_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta,  Brain_Cerebellum,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Whole_Blood

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