rs62297685 chr4:65589700 G>A
- Sequence
aatttaaaataaataaataataca[G/A]gtcagtctggttctaaaaaaagaa
- ASB in cell types
- 22RV1 (prostate carcinoma) VCaP (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.65 | -0.07 | 1.65 | -3.12 | Concordant | |||
| FOXA1_HUMAN | 1.42 | -0.04 | 1.91 | n/a | No Hit |
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Motif analysis
