rs62302715 chr4:77818185 T>G
- Sequence
aaatgtaacactgtgcttccaatg[T/G]gtacaaacggctcagctaaactcc
- ASB in cell types
- LNCaP (prostate carcinoma) MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- FOXA1_HUMAN TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.88 | 0.95 | 2.53 | -3.35 | Concordant | |||
| TBP_HUMAN | 1.64 | -0.09 | 1.00 | n/a | No Hit |
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Motif analysis
