rs62314280 chr4:73666089 G>T
- Sequence
taccactagaccatggtccacttg[G/T]caacaggcgtcttcccagatgctg
- ASB in cell types
- pancreas HUES64 (embryonic stem cells) LNCaP (prostate carcinoma) GM10847 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.69 | 0.56 | 1.18 | n/a | No Hit | |||
| RAD21_HUMAN | 2.13 | -1.86 | 1.58 | n/a | n/a |
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