rs62333237 chr5:2759954 T>C

Sequence
gtaaacttcgcatttatttctccc[T/C]ttggaggtcagcagaggcccagga
ASB for transcription factors
CTCF_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.59 -0.11 0.011.00 2.00 0.81 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Pituitary,  Skin_Sun_Exposed_Lower_leg

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