rs62338221 chr4:184815299 C>T
- Sequence
ggcagggaggaggccctgaaggag[C/T]ggcaggtgggctggggactcgcag
- ASB in cell types
- 22RV1 (prostate carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- PKNX1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | -1.85 | 2.25 | 1.00 | 3.98 | Concordant | |||
| ANDR_HUMAN | 2.08 | -0.61 | 2.00 | n/a | No Hit |
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Motif analysis
