rs636291 chr1:10496040 G>A

Sequence
tcttcctgcgtagcgatagcaggc[G/A]tagggctgtactgccaaggctttg
ASB for transcription factors
P63_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P63_HUMAN 0.12 1.01 1.000.04 1.00 0.38 Weak Concordant
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Motif analysis

P63_HUMAN Weak Concordant
P63_HUMAN pic

Genetic associations

EMBL-EBI prostate cancer
GRASP aortic valve calcium,  ldl cholesterol,  total cholesterol,  years of education
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Testis,  Thyroid,  Whole_Blood

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