rs6590357 chr11:128911444 T>C

Sequence
acgccagcgctacatggagaagag[T/C]ggcaagtgcaacgtgcaccacggc
ASB in cell types
WA01 (H1, human embryonic stem cells)
ASB for transcription factors
BHE40_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN n/a 2.59 1.005.6·10-3 1.00 -0.05 Weak Discordant
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Motif analysis

BHE40_HUMAN Weak Discordant
BHE40_HUMAN pic

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Artery_Aorta Artery_Tibial Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Heart_Atrial_Appendage Heart_Left_Ventricle Pituitary

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