rs6591228 chr11:66956900 A>C
- Sequence
tgccttgctgcttaggttttgttt[A/C]ttttctctctcccccaatgggttt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- MNT_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 3.13 | -2.83 | 1.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.55 | -0.59 | 1.50 | -4.35 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid, Whole_Blood